Haghverdi Lab
We develop mathematical and computational methods facilitating extraction of statistically sound knowledge from high-throughput biological data.
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CelltypeLabelTransfer
CelltypeLabelTransfer PublicBenchmark of existing cell type lable transfer methods and analysis on how the careful selection of the reference data can improve the predictions.
Jupyter Notebook 2
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Repositories
Showing 10 of 11 repositories
- scHiC-Energy-Landscape Public
- Compound-SNE Public
- velocity_package Public template
- CCLONE_notebooks Public
- CCLONE Public
- ATAC_RNA_ModelScripts Public
Scripts and analysis of Sid's master thesis, "Information content and cross-modality relationship between scATAC-seq and scRNA-seq in stationary and transitory cell states"
- CelltypeLabelTransfer Public
Benchmark of existing cell type lable transfer methods and analysis on how the careful selection of the reference data can improve the predictions.
- cellAnnotation_Benchmark Public
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