cpgbins: bugfix in unweighted mean calculations - #295

Merged

andrewdavidsmith merged 5 commits into

Sep 16, 2025

Commits on Sep 16, 2025

src/common/LevelsCounter.hpp: just moving some things around
andrewdavidsmith
committed
e38cc02
src/common/bsutils.cpp: cleaning up and adding some safety checks in the wilson ci for binom
andrewdavidsmith
committed
773b2d3
src/common/xcounts_utils.hpp: adding an output function for xcounts_entry and some helper functions
andrewdavidsmith
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4fa3840
src/analysis/cpgbins.cpp: bug was that the wrong value was accumulaed for unweighted mean methylation and fractional methylation. fixed now
andrewdavidsmith
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9395d63
src/analysis/cpgbins.cpp: requiring output file (not stdout) and not reporting the counts in the name field if more info is requested with the -M flag as it's redundant and annoying
andrewdavidsmith
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a81fd22